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Cluster: HRGMv2_4523_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4523_4 HRGMv2_4523_4_27 31283 34039 - GH2
CAZyme HRGMv2_4523_4 HRGMv2_4523_4_28 34231 35175 - GH43_24
sulfatase HRGMv2_4523_4 HRGMv2_4523_4_29 35233 36627 - S1_30
TC HRGMv2_4523_4 HRGMv2_4523_4_30 36629 37522 - 3.A.1.1.10
TC HRGMv2_4523_4 HRGMv2_4523_4_31 37535 38449 - 3.A.1.1.10
STP HRGMv2_4523_4 HRGMv2_4523_4_32 38532 40154 - SBP_bac_1
TF HRGMv2_4523_4 HRGMv2_4523_4_33 40614 42569 - HTH_AraC
TC HRGMv2_4523_4 HRGMv2_4523_4_34 42752 43390 + 9.B.28.1.3
Gene ID: HRGMv2_4523_4_27
Type: CAZyme
Location: 31283 - 34039 (-)
Gene ID: HRGMv2_4523_4_28
Type: CAZyme
Location: 34231 - 35175 (-)
Gene ID: HRGMv2_4523_4_29
Type: sulfatase
Location: 35233 - 36627 (-)
Gene ID: HRGMv2_4523_4_30
Type: TC
Location: 36629 - 37522 (-)
Gene ID: HRGMv2_4523_4_31
Type: TC
Location: 37535 - 38449 (-)
Gene ID: HRGMv2_4523_4_32
Type: STP
Location: 38532 - 40154 (-)
Gene ID: HRGMv2_4523_4_33
Type: TF
Location: 40614 - 42569 (-)
Gene ID: HRGMv2_4523_4_34
Type: TC
Location: 42752 - 43390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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