Cluster: HRGMv2_4523_CGC22
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4523
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_18 | 19701 | 21056 | + | 2.A.40.1.4 |
| STP | HRGMv2_4523_20 | HRGMv2_4523_20_19 | 21214 | 22467 | - | Aminotran_1_2 |
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_20 | 22816 | 26097 | + | 3.A.1.122.13 |
| CAZyme | HRGMv2_4523_20 | HRGMv2_4523_20_21 | 26233 | 29007 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_4523_20 | HRGMv2_4523_20_22 | 29004 | 29108 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4523_20 | HRGMv2_4523_20_23 | 29275 | 29652 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_24 | 29737 | 30513 | - | 3.A.1.3.25 |
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_25 | 30497 | 31195 | - | 3.A.1.3.17 |
| STP | HRGMv2_4523_20 | HRGMv2_4523_20_26 | 31283 | 32152 | - | SBP_bac_3 |
| pfam | HRGMv2_4523_20 | HRGMv2_4523_20_27 | 32396 | 33337 | - | cobW | DUF1980_C |
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_28 | 33348 | 34565 | - | 9.B.10.1.1 |
| TC | HRGMv2_4523_20 | HRGMv2_4523_20_29 | 34828 | 36003 | - | 2.A.36.2.1 |
Gene ID: HRGMv2_4523_20_18
Type: TC
Location: 19701 - 21056 (+)
Type: TC
Location: 19701 - 21056 (+)
Gene ID: HRGMv2_4523_20_19
Type: STP
Location: 21214 - 22467 (-)
Type: STP
Location: 21214 - 22467 (-)
Gene ID: HRGMv2_4523_20_20
Type: TC
Location: 22816 - 26097 (+)
Type: TC
Location: 22816 - 26097 (+)
Gene ID: HRGMv2_4523_20_21
Type: CAZyme
Location: 26233 - 29007 (+)
Type: CAZyme
Location: 26233 - 29007 (+)
Gene ID: HRGMv2_4523_20_22
Type:
Location: 29004 - 29108 (+)
Type:
Location: 29004 - 29108 (+)
Gene ID: HRGMv2_4523_20_23
Type:
Location: 29275 - 29652 (+)
Type:
Location: 29275 - 29652 (+)
Gene ID: HRGMv2_4523_20_24
Type: TC
Location: 29737 - 30513 (-)
Type: TC
Location: 29737 - 30513 (-)
Gene ID: HRGMv2_4523_20_25
Type: TC
Location: 30497 - 31195 (-)
Type: TC
Location: 30497 - 31195 (-)
Gene ID: HRGMv2_4523_20_26
Type: STP
Location: 31283 - 32152 (-)
Type: STP
Location: 31283 - 32152 (-)
Gene ID: HRGMv2_4523_20_27
Type: pfam
Location: 32396 - 33337 (-)
Type: pfam
Location: 32396 - 33337 (-)
Gene ID: HRGMv2_4523_20_28
Type: TC
Location: 33348 - 34565 (-)
Type: TC
Location: 33348 - 34565 (-)
Gene ID: HRGMv2_4523_20_29
Type: TC
Location: 34828 - 36003 (-)
Type: TC
Location: 34828 - 36003 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp019418025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.