Cluster: HRGMv2_4523_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4523
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4523_8 | HRGMv2_4523_8_9 | 9291 | 10160 | + | 2.A.7.2.1 |
| CAZyme | HRGMv2_4523_8 | HRGMv2_4523_8_10 | 10281 | 12875 | - | GH16_8 |
| TC | HRGMv2_4523_8 | HRGMv2_4523_8_11 | 13451 | 15337 | + | 4.A.1.2.2 |
| CAZyme | HRGMv2_4523_8 | HRGMv2_4523_8_12 | 15367 | 16782 | + | GH1 |
| TF | HRGMv2_4523_8 | HRGMv2_4523_8_13 | 17042 | 17467 | + | MarR |
| TC | HRGMv2_4523_8 | HRGMv2_4523_8_14 | 17502 | 19082 | + | 3.A.1.135.6 |
| TC | HRGMv2_4523_8 | HRGMv2_4523_8_15 | 19291 | 21051 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_4523_8_9
Type: TC
Location: 9291 - 10160 (+)
Type: TC
Location: 9291 - 10160 (+)
Gene ID: HRGMv2_4523_8_10
Type: CAZyme
Location: 10281 - 12875 (-)
Type: CAZyme
Location: 10281 - 12875 (-)
Gene ID: HRGMv2_4523_8_11
Type: TC
Location: 13451 - 15337 (+)
Type: TC
Location: 13451 - 15337 (+)
Gene ID: HRGMv2_4523_8_12
Type: CAZyme
Location: 15367 - 16782 (+)
Type: CAZyme
Location: 15367 - 16782 (+)
Gene ID: HRGMv2_4523_8_13
Type: TF
Location: 17042 - 17467 (+)
Type: TF
Location: 17042 - 17467 (+)
Gene ID: HRGMv2_4523_8_14
Type: TC
Location: 17502 - 19082 (+)
Type: TC
Location: 17502 - 19082 (+)
Gene ID: HRGMv2_4523_8_15
Type: TC
Location: 19291 - 21051 (+)
Type: TC
Location: 19291 - 21051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp019418025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.