dbCAN Logo

Cluster: HRGMv2_4523_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4523_6 HRGMv2_4523_6_48 56361 57773 + 2.A.2.3.1
CAZyme HRGMv2_4523_6 HRGMv2_4523_6_49 57926 59791 - GH20
TC HRGMv2_4523_6 HRGMv2_4523_6_50 60231 61121 + 3.A.1.1.10
TC HRGMv2_4523_6 HRGMv2_4523_6_51 61135 62079 + 3.A.1.1.29
pfam HRGMv2_4523_6 HRGMv2_4523_6_52 62166 63656 + DUF3502
CAZyme HRGMv2_4523_6 HRGMv2_4523_6_53 63838 66975 + GH38
pfam HRGMv2_4523_6 HRGMv2_4523_6_54 67144 68019 + Aldose_epim
CAZyme HRGMv2_4523_6 HRGMv2_4523_6_55 68131 70524 + GH2
Gene ID: HRGMv2_4523_6_48
Type: TC
Location: 56361 - 57773 (+)
Gene ID: HRGMv2_4523_6_49
Type: CAZyme
Location: 57926 - 59791 (-)
Gene ID: HRGMv2_4523_6_50
Type: TC
Location: 60231 - 61121 (+)
Gene ID: HRGMv2_4523_6_51
Type: TC
Location: 61135 - 62079 (+)
Gene ID: HRGMv2_4523_6_52
Type: pfam
Location: 62166 - 63656 (+)
Gene ID: HRGMv2_4523_6_53
Type: CAZyme
Location: 63838 - 66975 (+)
Gene ID: HRGMv2_4523_6_54
Type: pfam
Location: 67144 - 68019 (+)
Gene ID: HRGMv2_4523_6_55
Type: CAZyme
Location: 68131 - 70524 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List