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Cluster: HRGMv2_4521_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4521_5 HRGMv2_4521_5_25 32480 33238 + 2.A.5.5.2
NULL(UNKNOWN) HRGMv2_4521_5 HRGMv2_4521_5_26 33303 33977 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4521_5 HRGMv2_4521_5_27 33970 35514 - DUF1538 | DUF1538
TC HRGMv2_4521_5 HRGMv2_4521_5_28 35644 36555 - 1.A.35.3.2
NULL(UNKNOWN) HRGMv2_4521_5 HRGMv2_4521_5_29 36669 37967 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4521_5 HRGMv2_4521_5_30 38125 39150 - GT2
pfam HRGMv2_4521_5 HRGMv2_4521_5_31 39165 40328 - FAD_binding_2 | DAO | Amino_oxidase | GLF | NAD_binding_8
sulfatase HRGMv2_4521_5 HRGMv2_4521_5_32 40519 41052 - S1_4
TC HRGMv2_4521_5 HRGMv2_4521_5_33 41185 41970 - 3.A.1.3.10
TC HRGMv2_4521_5 HRGMv2_4521_5_34 41986 42657 - 3.A.1.3.15
Gene ID: HRGMv2_4521_5_25
Type: TC
Location: 32480 - 33238 (+)
Gene ID: HRGMv2_4521_5_26
Type:
Location: 33303 - 33977 (-)
Gene ID: HRGMv2_4521_5_27
Type: pfam
Location: 33970 - 35514 (-)
Gene ID: HRGMv2_4521_5_28
Type: TC
Location: 35644 - 36555 (-)
Gene ID: HRGMv2_4521_5_29
Type:
Location: 36669 - 37967 (-)
Gene ID: HRGMv2_4521_5_30
Type: CAZyme
Location: 38125 - 39150 (-)
Gene ID: HRGMv2_4521_5_31
Type: pfam
Location: 39165 - 40328 (-)
Gene ID: HRGMv2_4521_5_32
Type: sulfatase
Location: 40519 - 41052 (-)
Gene ID: HRGMv2_4521_5_33
Type: TC
Location: 41185 - 41970 (-)
Gene ID: HRGMv2_4521_5_34
Type: TC
Location: 41986 - 42657 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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