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Cluster: HRGMv2_4521_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4521_5 HRGMv2_4521_5_10 11047 11727 + 2.A.115.2.9
pfam HRGMv2_4521_5 HRGMv2_4521_5_11 11806 13179 + Flavodoxin_1 | Rubredoxin | Lactamase_B | Lactamase_B_2 | ODP
pfam HRGMv2_4521_5 HRGMv2_4521_5_12 13233 13682 - DUF386
CAZyme HRGMv2_4521_5 HRGMv2_4521_5_13 13695 16121 - GT35
CAZyme HRGMv2_4521_5 HRGMv2_4521_5_14 16160 17992 - GT5
pfam HRGMv2_4521_5 HRGMv2_4521_5_15 18096 19211 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4521_5 HRGMv2_4521_5_16 19213 20427 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4521_5 HRGMv2_4521_5_17 20471 22537 - CBM48 | GH13_9
Gene ID: HRGMv2_4521_5_10
Type: TC
Location: 11047 - 11727 (+)
Gene ID: HRGMv2_4521_5_11
Type: pfam
Location: 11806 - 13179 (+)
Gene ID: HRGMv2_4521_5_12
Type: pfam
Location: 13233 - 13682 (-)
Gene ID: HRGMv2_4521_5_13
Type: CAZyme
Location: 13695 - 16121 (-)
Gene ID: HRGMv2_4521_5_14
Type: CAZyme
Location: 16160 - 17992 (-)
Gene ID: HRGMv2_4521_5_15
Type: pfam
Location: 18096 - 19211 (-)
Gene ID: HRGMv2_4521_5_16
Type: pfam
Location: 19213 - 20427 (-)
Gene ID: HRGMv2_4521_5_17
Type: CAZyme
Location: 20471 - 22537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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