Cluster: HRGMv2_4520_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- CGC Family ID: CGCFAM_02085
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4520_11 | HRGMv2_4520_11_27 | 32849 | 33643 | - | GH25 |
| pfam | HRGMv2_4520_11 | HRGMv2_4520_11_28 | 33770 | 34321 | + | DUF3793 |
| TC | HRGMv2_4520_11 | HRGMv2_4520_11_29 | 34495 | 35409 | + | 3.A.1.131.1 |
Gene ID: HRGMv2_4520_11_27
Type: CAZyme
Location: 32849 - 33643 (-)
Type: CAZyme
Location: 32849 - 33643 (-)
Gene ID: HRGMv2_4520_11_28
Type: pfam
Location: 33770 - 34321 (+)
Type: pfam
Location: 33770 - 34321 (+)
Gene ID: HRGMv2_4520_11_29
Type: TC
Location: 34495 - 35409 (+)
Type: TC
Location: 34495 - 35409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.