Cluster: HRGMv2_4520_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4520_7 | HRGMv2_4520_7_105 | 109498 | 111783 | + | 3.A.9.1.2 |
| pfam | HRGMv2_4520_7 | HRGMv2_4520_7_106 | 112544 | 113275 | - | Amidase_3 |
| TF | HRGMv2_4520_7 | HRGMv2_4520_7_107 | 113469 | 114401 | + | HTH_1 |
| CAZyme | HRGMv2_4520_7 | HRGMv2_4520_7_108 | 114424 | 116886 | + | GH2 |
| pfam | HRGMv2_4520_7 | HRGMv2_4520_7_109 | 116963 | 118189 | - | Spore_GerAC |
| pfam | HRGMv2_4520_7 | HRGMv2_4520_7_110 | 118204 | 119256 | - | Spore_permease |
| TC | HRGMv2_4520_7 | HRGMv2_4520_7_111 | 119289 | 120776 | - | 9.A.11.1.2 |
Gene ID: HRGMv2_4520_7_105
Type: TC
Location: 109498 - 111783 (+)
Type: TC
Location: 109498 - 111783 (+)
Gene ID: HRGMv2_4520_7_106
Type: pfam
Location: 112544 - 113275 (-)
Type: pfam
Location: 112544 - 113275 (-)
Gene ID: HRGMv2_4520_7_107
Type: TF
Location: 113469 - 114401 (+)
Type: TF
Location: 113469 - 114401 (+)
Gene ID: HRGMv2_4520_7_108
Type: CAZyme
Location: 114424 - 116886 (+)
Type: CAZyme
Location: 114424 - 116886 (+)
Gene ID: HRGMv2_4520_7_109
Type: pfam
Location: 116963 - 118189 (-)
Type: pfam
Location: 116963 - 118189 (-)
Gene ID: HRGMv2_4520_7_110
Type: pfam
Location: 118204 - 119256 (-)
Type: pfam
Location: 118204 - 119256 (-)
Gene ID: HRGMv2_4520_7_111
Type: TC
Location: 119289 - 120776 (-)
Type: TC
Location: 119289 - 120776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.