Cluster: HRGMv2_4520_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4520_6 | HRGMv2_4520_6_1 | 3 | 2366 | - | CBM35 | GH26 |
| pfam | HRGMv2_4520_6 | HRGMv2_4520_6_2 | 2506 | 3711 | + | RrnaAD | TRM5-TYW2_MTfase | Cons_hypoth95 | MTS | tRNA_U5-meth_tr | Methyltransf_15 | Methyltransf_31 |
| TC | HRGMv2_4520_6 | HRGMv2_4520_6_3 | 3885 | 5051 | + | 3.A.1.4.1 |
| TC | HRGMv2_4520_6 | HRGMv2_4520_6_4 | 5294 | 6175 | + | 3.A.1.4.10 |
| TC | HRGMv2_4520_6 | HRGMv2_4520_6_5 | 6202 | 7284 | + | 3.A.1.4.8 |
| TC | HRGMv2_4520_6 | HRGMv2_4520_6_6 | 7287 | 8045 | + | 3.A.1.4.10 |
| TC | HRGMv2_4520_6 | HRGMv2_4520_6_7 | 8058 | 8768 | + | 3.A.1.4.10 |
Gene ID: HRGMv2_4520_6_1
Type: CAZyme
Location: 3 - 2366 (-)
Type: CAZyme
Location: 3 - 2366 (-)
Gene ID: HRGMv2_4520_6_2
Type: pfam
Location: 2506 - 3711 (+)
Type: pfam
Location: 2506 - 3711 (+)
Gene ID: HRGMv2_4520_6_3
Type: TC
Location: 3885 - 5051 (+)
Type: TC
Location: 3885 - 5051 (+)
Gene ID: HRGMv2_4520_6_4
Type: TC
Location: 5294 - 6175 (+)
Type: TC
Location: 5294 - 6175 (+)
Gene ID: HRGMv2_4520_6_5
Type: TC
Location: 6202 - 7284 (+)
Type: TC
Location: 6202 - 7284 (+)
Gene ID: HRGMv2_4520_6_6
Type: TC
Location: 7287 - 8045 (+)
Type: TC
Location: 7287 - 8045 (+)
Gene ID: HRGMv2_4520_6_7
Type: TC
Location: 8058 - 8768 (+)
Type: TC
Location: 8058 - 8768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.