Cluster: HRGMv2_4520_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- CGC Family ID: CGCFAM_04237
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4520_27 | HRGMv2_4520_27_143 | 169504 | 170448 | + | GT2 |
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_144 | 170449 | 173274 | + | 9.B.144.1.5 |
| NULL(UNKNOWN) | HRGMv2_4520_27 | HRGMv2_4520_27_145 | 173246 | 173383 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4520_27 | HRGMv2_4520_27_146 | 173456 | 174262 | + | Zn_Ribbon_1 | Zn_ribbon_3 |
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_147 | 174679 | 177339 | - | 3.A.3.2.21 |
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_148 | 177644 | 179308 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_4520_27_143
Type: CAZyme
Location: 169504 - 170448 (+)
Type: CAZyme
Location: 169504 - 170448 (+)
Gene ID: HRGMv2_4520_27_144
Type: TC
Location: 170449 - 173274 (+)
Type: TC
Location: 170449 - 173274 (+)
Gene ID: HRGMv2_4520_27_145
Type:
Location: 173246 - 173383 (+)
Type:
Location: 173246 - 173383 (+)
Gene ID: HRGMv2_4520_27_146
Type: pfam
Location: 173456 - 174262 (+)
Type: pfam
Location: 173456 - 174262 (+)
Gene ID: HRGMv2_4520_27_147
Type: TC
Location: 174679 - 177339 (-)
Type: TC
Location: 174679 - 177339 (-)
Gene ID: HRGMv2_4520_27_148
Type: TC
Location: 177644 - 179308 (+)
Type: TC
Location: 177644 - 179308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.