Cluster: HRGMv2_4520_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- CGC Family ID: CGCFAM_04917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_67 | 81940 | 82968 | + | 3.A.1.1.11 |
| pfam | HRGMv2_4520_27 | HRGMv2_4520_27_68 | 83047 | 84222 | + | MFS_1 |
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_69 | 84336 | 85127 | + | 2.A.5.5.2 |
| pfam | HRGMv2_4520_27 | HRGMv2_4520_27_70 | 85170 | 86138 | - | Asparaginase |
| CAZyme | HRGMv2_4520_27 | HRGMv2_4520_27_71 | 86467 | 87774 | + | GH13_20 |
Gene ID: HRGMv2_4520_27_67
Type: TC
Location: 81940 - 82968 (+)
Type: TC
Location: 81940 - 82968 (+)
Gene ID: HRGMv2_4520_27_68
Type: pfam
Location: 83047 - 84222 (+)
Type: pfam
Location: 83047 - 84222 (+)
Gene ID: HRGMv2_4520_27_69
Type: TC
Location: 84336 - 85127 (+)
Type: TC
Location: 84336 - 85127 (+)
Gene ID: HRGMv2_4520_27_70
Type: pfam
Location: 85170 - 86138 (-)
Type: pfam
Location: 85170 - 86138 (-)
Gene ID: HRGMv2_4520_27_71
Type: CAZyme
Location: 86467 - 87774 (+)
Type: CAZyme
Location: 86467 - 87774 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.