Cluster: HRGMv2_4520_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4520
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_1 | 208 | 657 | + | 1.A.22.1.3 |
| TF | HRGMv2_4520_27 | HRGMv2_4520_27_2 | 706 | 915 | - | HTH_3 |
| CAZyme | HRGMv2_4520_27 | HRGMv2_4520_27_3 | 1003 | 3264 | + | CBM37 |
| CAZyme | HRGMv2_4520_27 | HRGMv2_4520_27_4 | 3376 | 4719 | - | GH26 |
| pfam | HRGMv2_4520_27 | HRGMv2_4520_27_5 | 4917 | 5483 | + | TetR_C_33 |
| TC | HRGMv2_4520_27 | HRGMv2_4520_27_6 | 5485 | 6213 | + | 3.A.1.105.1 |
Gene ID: HRGMv2_4520_27_1
Type: TC
Location: 208 - 657 (+)
Type: TC
Location: 208 - 657 (+)
Gene ID: HRGMv2_4520_27_2
Type: TF
Location: 706 - 915 (-)
Type: TF
Location: 706 - 915 (-)
Gene ID: HRGMv2_4520_27_3
Type: CAZyme
Location: 1003 - 3264 (+)
Type: CAZyme
Location: 1003 - 3264 (+)
Gene ID: HRGMv2_4520_27_4
Type: CAZyme
Location: 3376 - 4719 (-)
Type: CAZyme
Location: 3376 - 4719 (-)
Gene ID: HRGMv2_4520_27_5
Type: pfam
Location: 4917 - 5483 (+)
Type: pfam
Location: 4917 - 5483 (+)
Gene ID: HRGMv2_4520_27_6
Type: TC
Location: 5485 - 6213 (+)
Type: TC
Location: 5485 - 6213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.