Cluster: HRGMv2_4520_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4520
- CGC Family ID: CGCFAM_01420
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4520_20 | HRGMv2_4520_20_136 | 130253 | 131458 | - | GT4 |
| CAZyme | HRGMv2_4520_20 | HRGMv2_4520_20_137 | 131587 | 132723 | - | GT4 |
| pfam | HRGMv2_4520_20 | HRGMv2_4520_20_138 | 133038 | 134462 | - | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2 | Hexapep_2 | Hexapep_2 |
| TC | HRGMv2_4520_20 | HRGMv2_4520_20_139 | 134932 | 137559 | + | 4.A.2.1.17 |
Gene ID: HRGMv2_4520_20_136
Type: CAZyme
Location: 130253 - 131458 (-)
Type: CAZyme
Location: 130253 - 131458 (-)
Gene ID: HRGMv2_4520_20_137
Type: CAZyme
Location: 131587 - 132723 (-)
Type: CAZyme
Location: 131587 - 132723 (-)
Gene ID: HRGMv2_4520_20_138
Type: pfam
Location: 133038 - 134462 (-)
Type: pfam
Location: 133038 - 134462 (-)
Gene ID: HRGMv2_4520_20_139
Type: TC
Location: 134932 - 137559 (+)
Type: TC
Location: 134932 - 137559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.