Cluster: HRGMv2_4520_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4520
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4520_17 | HRGMv2_4520_17_49 | 43890 | 46259 | - | GT35 |
| CAZyme | HRGMv2_4520_17 | HRGMv2_4520_17_50 | 46521 | 48011 | - | GH77 |
| TC | HRGMv2_4520_17 | HRGMv2_4520_17_51 | 48243 | 50369 | + | 4.A.1.1.9 |
| STP | HRGMv2_4520_17 | HRGMv2_4520_17_52 | 50394 | 50651 | + | PTS-HPr |
| TC | HRGMv2_4520_17 | HRGMv2_4520_17_53 | 50674 | 52311 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_4520_17_49
Type: CAZyme
Location: 43890 - 46259 (-)
Type: CAZyme
Location: 43890 - 46259 (-)
Gene ID: HRGMv2_4520_17_50
Type: CAZyme
Location: 46521 - 48011 (-)
Type: CAZyme
Location: 46521 - 48011 (-)
Gene ID: HRGMv2_4520_17_51
Type: TC
Location: 48243 - 50369 (+)
Type: TC
Location: 48243 - 50369 (+)
Gene ID: HRGMv2_4520_17_52
Type: STP
Location: 50394 - 50651 (+)
Type: STP
Location: 50394 - 50651 (+)
Gene ID: HRGMv2_4520_17_53
Type: TC
Location: 50674 - 52311 (+)
Type: TC
Location: 50674 - 52311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.