Cluster: HRGMv2_4520_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4520
- CGC Family ID: CGCFAM_04623
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4520_16 | HRGMv2_4520_16_21 | 22658 | 23173 | - | 9.B.156.3.1 |
| TC | HRGMv2_4520_16 | HRGMv2_4520_16_22 | 23160 | 23741 | - | 9.B.156.3.1 |
| TF | HRGMv2_4520_16 | HRGMv2_4520_16_23 | 23898 | 24143 | + | SpoVT_AbrB |
| TC | HRGMv2_4520_16 | HRGMv2_4520_16_24 | 24245 | 24967 | - | 3.A.1.103.6 |
| pfam | HRGMv2_4520_16 | HRGMv2_4520_16_25 | 24996 | 25856 | - | ABC2_membrane |
| CAZyme | HRGMv2_4520_16 | HRGMv2_4520_16_26 | 25868 | 26710 | - | GT2 |
Gene ID: HRGMv2_4520_16_21
Type: TC
Location: 22658 - 23173 (-)
Type: TC
Location: 22658 - 23173 (-)
Gene ID: HRGMv2_4520_16_22
Type: TC
Location: 23160 - 23741 (-)
Type: TC
Location: 23160 - 23741 (-)
Gene ID: HRGMv2_4520_16_23
Type: TF
Location: 23898 - 24143 (+)
Type: TF
Location: 23898 - 24143 (+)
Gene ID: HRGMv2_4520_16_24
Type: TC
Location: 24245 - 24967 (-)
Type: TC
Location: 24245 - 24967 (-)
Gene ID: HRGMv2_4520_16_25
Type: pfam
Location: 24996 - 25856 (-)
Type: pfam
Location: 24996 - 25856 (-)
Gene ID: HRGMv2_4520_16_26
Type: CAZyme
Location: 25868 - 26710 (-)
Type: CAZyme
Location: 25868 - 26710 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp019420505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.