Cluster: HRGMv2_4518_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4518
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4518_69 | HRGMv2_4518_69_5 | 6056 | 6715 | - | 1.C.113.1.3 |
| pfam | HRGMv2_4518_69 | HRGMv2_4518_69_6 | 6844 | 7458 | + | DUF1836 |
| peptidase | HRGMv2_4518_69 | HRGMv2_4518_69_7 | 7538 | 8977 | - | M17.UPW |
| CAZyme | HRGMv2_4518_69 | HRGMv2_4518_69_8 | 9066 | 9851 | - | CE4 |
Gene ID: HRGMv2_4518_69_5
Type: TC
Location: 6056 - 6715 (-)
Type: TC
Location: 6056 - 6715 (-)
Gene ID: HRGMv2_4518_69_6
Type: pfam
Location: 6844 - 7458 (+)
Type: pfam
Location: 6844 - 7458 (+)
Gene ID: HRGMv2_4518_69_7
Type: peptidase
Location: 7538 - 8977 (-)
Type: peptidase
Location: 7538 - 8977 (-)
Gene ID: HRGMv2_4518_69_8
Type: CAZyme
Location: 9066 - 9851 (-)
Type: CAZyme
Location: 9066 - 9851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Avimicrobium
Species
Avimicrobium sp900761965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.