Cluster: HRGMv2_4518_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4518
- CGC Family ID: CGCFAM_10304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4518_45 | HRGMv2_4518_45_45 | 43346 | 44065 | + | 9.B.120.1.3 |
| TC | HRGMv2_4518_45 | HRGMv2_4518_45_46 | 44262 | 44525 | + | 8.A.8.1.4 |
| STP | HRGMv2_4518_45 | HRGMv2_4518_45_47 | 44668 | 45186 | + | Nitroreductase | Nitroreductase |
| STP | HRGMv2_4518_45 | HRGMv2_4518_45_48 | 45251 | 46633 | - | Pyr_redox_2 |
| CAZyme | HRGMv2_4518_45 | HRGMv2_4518_45_49 | 46712 | 47896 | - | GT4 |
Gene ID: HRGMv2_4518_45_45
Type: TC
Location: 43346 - 44065 (+)
Type: TC
Location: 43346 - 44065 (+)
Gene ID: HRGMv2_4518_45_46
Type: TC
Location: 44262 - 44525 (+)
Type: TC
Location: 44262 - 44525 (+)
Gene ID: HRGMv2_4518_45_47
Type: STP
Location: 44668 - 45186 (+)
Type: STP
Location: 44668 - 45186 (+)
Gene ID: HRGMv2_4518_45_48
Type: STP
Location: 45251 - 46633 (-)
Type: STP
Location: 45251 - 46633 (-)
Gene ID: HRGMv2_4518_45_49
Type: CAZyme
Location: 46712 - 47896 (-)
Type: CAZyme
Location: 46712 - 47896 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Avimicrobium
Species
Avimicrobium sp900761965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.