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Cluster: HRGMv2_4436_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4436_5 HRGMv2_4436_5_29 32358 33062 + 3.A.1.125.2
TC HRGMv2_4436_5 HRGMv2_4436_5_30 33059 36340 + 3.A.1.137.2
pfam HRGMv2_4436_5 HRGMv2_4436_5_31 36408 36740 + RelE
TF HRGMv2_4436_5 HRGMv2_4436_5_32 36753 37064 + HTH_3
CAZyme HRGMv2_4436_5 HRGMv2_4436_5_33 37152 37898 - GT51
TC HRGMv2_4436_5 HRGMv2_4436_5_34 38064 38690 - 2.A.115.2.12
TC HRGMv2_4436_5 HRGMv2_4436_5_35 38745 39686 - 9.B.10.1.1
TC HRGMv2_4436_5 HRGMv2_4436_5_36 39699 40583 - 2.A.115.1.1
TC HRGMv2_4436_5 HRGMv2_4436_5_37 40629 41846 - 2.A.103.1.7
Gene ID: HRGMv2_4436_5_29
Type: TC
Location: 32358 - 33062 (+)
Gene ID: HRGMv2_4436_5_30
Type: TC
Location: 33059 - 36340 (+)
Gene ID: HRGMv2_4436_5_31
Type: pfam
Location: 36408 - 36740 (+)
Gene ID: HRGMv2_4436_5_32
Type: TF
Location: 36753 - 37064 (+)
Gene ID: HRGMv2_4436_5_33
Type: CAZyme
Location: 37152 - 37898 (-)
Gene ID: HRGMv2_4436_5_34
Type: TC
Location: 38064 - 38690 (-)
Gene ID: HRGMv2_4436_5_35
Type: TC
Location: 38745 - 39686 (-)
Gene ID: HRGMv2_4436_5_36
Type: TC
Location: 39699 - 40583 (-)
Gene ID: HRGMv2_4436_5_37
Type: TC
Location: 40629 - 41846 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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