Cluster: HRGMv2_4436_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4436
- CGC Family ID: CGCFAM_00115
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4436_3 | HRGMv2_4436_3_71 | 82152 | 83924 | + | GT4 |
| CAZyme | HRGMv2_4436_3 | HRGMv2_4436_3_72 | 83944 | 84975 | + | GT4 |
| TC | HRGMv2_4436_3 | HRGMv2_4436_3_73 | 85043 | 87607 | - | 3.A.3.5.15 |
Gene ID: HRGMv2_4436_3_71
Type: CAZyme
Location: 82152 - 83924 (+)
Type: CAZyme
Location: 82152 - 83924 (+)
Gene ID: HRGMv2_4436_3_72
Type: CAZyme
Location: 83944 - 84975 (+)
Type: CAZyme
Location: 83944 - 84975 (+)
Gene ID: HRGMv2_4436_3_73
Type: TC
Location: 85043 - 87607 (-)
Type: TC
Location: 85043 - 87607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.