Cluster: HRGMv2_4436_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- CGC Family ID: CGCFAM_10626
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_70 | HRGMv2_4436_70_2 | 511 | 2052 | + | 3.A.1.2.3 |
| TC | HRGMv2_4436_70 | HRGMv2_4436_70_3 | 2071 | 3069 | + | 3.A.1.2.3 |
| NULL(UNKNOWN) | HRGMv2_4436_70 | HRGMv2_4436_70_4 | 3162 | 3470 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4436_70 | HRGMv2_4436_70_5 | 3701 | 5071 | - | 2.A.40.7.2 |
| CAZyme | HRGMv2_4436_70 | HRGMv2_4436_70_6 | 5324 | 6283 | + | GT2 |
Gene ID: HRGMv2_4436_70_2
Type: TC
Location: 511 - 2052 (+)
Type: TC
Location: 511 - 2052 (+)
Gene ID: HRGMv2_4436_70_3
Type: TC
Location: 2071 - 3069 (+)
Type: TC
Location: 2071 - 3069 (+)
Gene ID: HRGMv2_4436_70_4
Type:
Location: 3162 - 3470 (+)
Type:
Location: 3162 - 3470 (+)
Gene ID: HRGMv2_4436_70_5
Type: TC
Location: 3701 - 5071 (-)
Type: TC
Location: 3701 - 5071 (-)
Gene ID: HRGMv2_4436_70_6
Type: CAZyme
Location: 5324 - 6283 (+)
Type: CAZyme
Location: 5324 - 6283 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.