Cluster: HRGMv2_4436_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_56 | HRGMv2_4436_56_11 | 8705 | 9589 | + | 3.A.1.1.18 |
| TC | HRGMv2_4436_56 | HRGMv2_4436_56_12 | 9602 | 10498 | + | 3.A.1.1.25 |
| pfam | HRGMv2_4436_56 | HRGMv2_4436_56_13 | 10510 | 10701 | + | DUF6903 |
| CAZyme | HRGMv2_4436_56 | HRGMv2_4436_56_14 | 10731 | 12263 | + | GH112 |
Gene ID: HRGMv2_4436_56_11
Type: TC
Location: 8705 - 9589 (+)
Type: TC
Location: 8705 - 9589 (+)
Gene ID: HRGMv2_4436_56_12
Type: TC
Location: 9602 - 10498 (+)
Type: TC
Location: 9602 - 10498 (+)
Gene ID: HRGMv2_4436_56_13
Type: pfam
Location: 10510 - 10701 (+)
Type: pfam
Location: 10510 - 10701 (+)
Gene ID: HRGMv2_4436_56_14
Type: CAZyme
Location: 10731 - 12263 (+)
Type: CAZyme
Location: 10731 - 12263 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.