Cluster: HRGMv2_4436_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_24 | HRGMv2_4436_24_8 | 9674 | 11047 | - | 2.A.66.1.32 |
| pfam | HRGMv2_4436_24 | HRGMv2_4436_24_9 | 11476 | 12150 | - | His_Phos_1 |
| pfam | HRGMv2_4436_24 | HRGMv2_4436_24_10 | 12150 | 13319 | - | Fic |
| TC | HRGMv2_4436_24 | HRGMv2_4436_24_11 | 13720 | 15186 | + | 4.A.1.1.7 |
| CAZyme | HRGMv2_4436_24 | HRGMv2_4436_24_12 | 15428 | 16555 | + | CE9 |
| TF | HRGMv2_4436_24 | HRGMv2_4436_24_13 | 16641 | 17108 | - | MarR |
| TC | HRGMv2_4436_24 | HRGMv2_4436_24_14 | 17197 | 18864 | - | 2.A.35.2.1 |
Gene ID: HRGMv2_4436_24_8
Type: TC
Location: 9674 - 11047 (-)
Type: TC
Location: 9674 - 11047 (-)
Gene ID: HRGMv2_4436_24_9
Type: pfam
Location: 11476 - 12150 (-)
Type: pfam
Location: 11476 - 12150 (-)
Gene ID: HRGMv2_4436_24_10
Type: pfam
Location: 12150 - 13319 (-)
Type: pfam
Location: 12150 - 13319 (-)
Gene ID: HRGMv2_4436_24_11
Type: TC
Location: 13720 - 15186 (+)
Type: TC
Location: 13720 - 15186 (+)
Gene ID: HRGMv2_4436_24_12
Type: CAZyme
Location: 15428 - 16555 (+)
Type: CAZyme
Location: 15428 - 16555 (+)
Gene ID: HRGMv2_4436_24_13
Type: TF
Location: 16641 - 17108 (-)
Type: TF
Location: 16641 - 17108 (-)
Gene ID: HRGMv2_4436_24_14
Type: TC
Location: 17197 - 18864 (-)
Type: TC
Location: 17197 - 18864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.