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Cluster: HRGMv2_4436_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4436_21 HRGMv2_4436_21_4 4502 5449 + 3.A.1.34.1
TC HRGMv2_4436_21 HRGMv2_4436_21_5 5442 6236 + 3.A.1.34.1
CAZyme HRGMv2_4436_21 HRGMv2_4436_21_6 6344 7534 + GH3
pfam HRGMv2_4436_21 HRGMv2_4436_21_7 7830 8876 + TctC
pfam HRGMv2_4436_21 HRGMv2_4436_21_8 8932 9492 + TctB
TC HRGMv2_4436_21 HRGMv2_4436_21_9 9506 11029 + 2.A.80.1.1
pfam HRGMv2_4436_21 HRGMv2_4436_21_10 11044 12213 + Lactamase_B
TF HRGMv2_4436_21 HRGMv2_4436_21_11 12322 13002 + GntR
CAZyme HRGMv2_4436_21 HRGMv2_4436_21_12 13127 15109 + GH151
Gene ID: HRGMv2_4436_21_4
Type: TC
Location: 4502 - 5449 (+)
Gene ID: HRGMv2_4436_21_5
Type: TC
Location: 5442 - 6236 (+)
Gene ID: HRGMv2_4436_21_6
Type: CAZyme
Location: 6344 - 7534 (+)
Gene ID: HRGMv2_4436_21_7
Type: pfam
Location: 7830 - 8876 (+)
Gene ID: HRGMv2_4436_21_8
Type: pfam
Location: 8932 - 9492 (+)
Gene ID: HRGMv2_4436_21_9
Type: TC
Location: 9506 - 11029 (+)
Gene ID: HRGMv2_4436_21_10
Type: pfam
Location: 11044 - 12213 (+)
Gene ID: HRGMv2_4436_21_11
Type: TF
Location: 12322 - 13002 (+)
Gene ID: HRGMv2_4436_21_12
Type: CAZyme
Location: 13127 - 15109 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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