Cluster: HRGMv2_4436_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- CGC Family ID: CGCFAM_00605
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_15 | HRGMv2_4436_15_24 | 20676 | 22019 | - | 2.A.66.1.33 |
| pfam | HRGMv2_4436_15 | HRGMv2_4436_15_25 | 22168 | 23037 | - | SAICAR_synt |
| CAZyme | HRGMv2_4436_15 | HRGMv2_4436_15_26 | 23426 | 24859 | + | GH1 |
| sulfatase | HRGMv2_4436_15 | HRGMv2_4436_15_27 | 24882 | 25847 | + | S1_15 |
| TF | HRGMv2_4436_15 | HRGMv2_4436_15_28 | 26022 | 26501 | + | MarR |
| TC | HRGMv2_4436_15 | HRGMv2_4436_15_29 | 26636 | 28387 | + | 3.A.1.135.5 |
| TC | HRGMv2_4436_15 | HRGMv2_4436_15_30 | 28387 | 30309 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4436_15_24
Type: TC
Location: 20676 - 22019 (-)
Type: TC
Location: 20676 - 22019 (-)
Gene ID: HRGMv2_4436_15_25
Type: pfam
Location: 22168 - 23037 (-)
Type: pfam
Location: 22168 - 23037 (-)
Gene ID: HRGMv2_4436_15_26
Type: CAZyme
Location: 23426 - 24859 (+)
Type: CAZyme
Location: 23426 - 24859 (+)
Gene ID: HRGMv2_4436_15_27
Type: sulfatase
Location: 24882 - 25847 (+)
Type: sulfatase
Location: 24882 - 25847 (+)
Gene ID: HRGMv2_4436_15_28
Type: TF
Location: 26022 - 26501 (+)
Type: TF
Location: 26022 - 26501 (+)
Gene ID: HRGMv2_4436_15_29
Type: TC
Location: 26636 - 28387 (+)
Type: TC
Location: 26636 - 28387 (+)
Gene ID: HRGMv2_4436_15_30
Type: TC
Location: 28387 - 30309 (+)
Type: TC
Location: 28387 - 30309 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.