Cluster: HRGMv2_4436_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- CGC Family ID: CGCFAM_00555
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_14 | HRGMv2_4436_14_2 | 829 | 2052 | - | 9.B.10.1.1 |
| NULL(UNKNOWN) | HRGMv2_4436_14 | HRGMv2_4436_14_3 | 2285 | 2530 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_4436_14 | HRGMv2_4436_14_4 | 3054 | 4853 | + | M24.UPB |
| CAZyme | HRGMv2_4436_14 | HRGMv2_4436_14_5 | 4902 | 5843 | - | GT2 |
Gene ID: HRGMv2_4436_14_2
Type: TC
Location: 829 - 2052 (-)
Type: TC
Location: 829 - 2052 (-)
Gene ID: HRGMv2_4436_14_3
Type:
Location: 2285 - 2530 (-)
Type:
Location: 2285 - 2530 (-)
Gene ID: HRGMv2_4436_14_4
Type: peptidase
Location: 3054 - 4853 (+)
Type: peptidase
Location: 3054 - 4853 (+)
Gene ID: HRGMv2_4436_14_5
Type: CAZyme
Location: 4902 - 5843 (-)
Type: CAZyme
Location: 4902 - 5843 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.