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Cluster: HRGMv2_4436_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4436_13 HRGMv2_4436_13_22 25742 27187 - 2.A.66.2.10
NULL(UNKNOWN) HRGMv2_4436_13 HRGMv2_4436_13_23 27213 27986 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4436_13 HRGMv2_4436_13_24 28267 29229 - GT2
pfam HRGMv2_4436_13 HRGMv2_4436_13_25 29248 30399 - EpsG
CAZyme HRGMv2_4436_13 HRGMv2_4436_13_26 30418 31410 - GT2
pfam HRGMv2_4436_13 HRGMv2_4436_13_27 31412 32581 - Wzy_C
CAZyme HRGMv2_4436_13 HRGMv2_4436_13_28 32646 33620 - GT2
CAZyme HRGMv2_4436_13 HRGMv2_4436_13_29 33617 34735 - GT4
TC HRGMv2_4436_13 HRGMv2_4436_13_30 34789 36240 - 9.B.18.1.2
TC HRGMv2_4436_13 HRGMv2_4436_13_31 36995 37660 - 9.B.31.1.1
Gene ID: HRGMv2_4436_13_22
Type: TC
Location: 25742 - 27187 (-)
Gene ID: HRGMv2_4436_13_23
Type:
Location: 27213 - 27986 (-)
Gene ID: HRGMv2_4436_13_24
Type: CAZyme
Location: 28267 - 29229 (-)
Gene ID: HRGMv2_4436_13_25
Type: pfam
Location: 29248 - 30399 (-)
Gene ID: HRGMv2_4436_13_26
Type: CAZyme
Location: 30418 - 31410 (-)
Gene ID: HRGMv2_4436_13_27
Type: pfam
Location: 31412 - 32581 (-)
Gene ID: HRGMv2_4436_13_28
Type: CAZyme
Location: 32646 - 33620 (-)
Gene ID: HRGMv2_4436_13_29
Type: CAZyme
Location: 33617 - 34735 (-)
Gene ID: HRGMv2_4436_13_30
Type: TC
Location: 34789 - 36240 (-)
Gene ID: HRGMv2_4436_13_31
Type: TC
Location: 36995 - 37660 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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