Cluster: HRGMv2_4436_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4436
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4436_12 | HRGMv2_4436_12_34 | 33266 | 34381 | + | 2.A.56.1.1 |
| pfam | HRGMv2_4436_12 | HRGMv2_4436_12_35 | 34464 | 34961 | + | DctQ |
| TC | HRGMv2_4436_12 | HRGMv2_4436_12_36 | 34964 | 36247 | + | 2.A.56.1.6 |
| peptidase | HRGMv2_4436_12 | HRGMv2_4436_12_37 | 36287 | 37423 | + | M38.UNW |
| CAZyme | HRGMv2_4436_12 | HRGMv2_4436_12_38 | 37522 | 39957 | - | GH94 |
Gene ID: HRGMv2_4436_12_34
Type: TC
Location: 33266 - 34381 (+)
Type: TC
Location: 33266 - 34381 (+)
Gene ID: HRGMv2_4436_12_35
Type: pfam
Location: 34464 - 34961 (+)
Type: pfam
Location: 34464 - 34961 (+)
Gene ID: HRGMv2_4436_12_36
Type: TC
Location: 34964 - 36247 (+)
Type: TC
Location: 34964 - 36247 (+)
Gene ID: HRGMv2_4436_12_37
Type: peptidase
Location: 36287 - 37423 (+)
Type: peptidase
Location: 36287 - 37423 (+)
Gene ID: HRGMv2_4436_12_38
Type: CAZyme
Location: 37522 - 39957 (-)
Type: CAZyme
Location: 37522 - 39957 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934547065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.