Cluster: HRGMv2_4435_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- CGC Family ID: CGCFAM_00357
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_15 | HRGMv2_4435_15_21 | 16157 | 17065 | - | CE17 |
| NULL(UNKNOWN) | HRGMv2_4435_15 | HRGMv2_4435_15_22 | 17087 | 17236 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4435_15 | HRGMv2_4435_15_23 | 17738 | 18871 | + | 3.A.1.11.8 |
| TC | HRGMv2_4435_15 | HRGMv2_4435_15_24 | 18868 | 19695 | + | 3.A.1.11.8 |
| TC | HRGMv2_4435_15 | HRGMv2_4435_15_25 | 19692 | 20501 | + | 3.A.1.11.2 |
| TC | HRGMv2_4435_15 | HRGMv2_4435_15_26 | 20528 | 21640 | + | 3.A.1.11.7 |
Gene ID: HRGMv2_4435_15_21
Type: CAZyme
Location: 16157 - 17065 (-)
Type: CAZyme
Location: 16157 - 17065 (-)
Gene ID: HRGMv2_4435_15_22
Type:
Location: 17087 - 17236 (-)
Type:
Location: 17087 - 17236 (-)
Gene ID: HRGMv2_4435_15_23
Type: TC
Location: 17738 - 18871 (+)
Type: TC
Location: 17738 - 18871 (+)
Gene ID: HRGMv2_4435_15_24
Type: TC
Location: 18868 - 19695 (+)
Type: TC
Location: 18868 - 19695 (+)
Gene ID: HRGMv2_4435_15_25
Type: TC
Location: 19692 - 20501 (+)
Type: TC
Location: 19692 - 20501 (+)
Gene ID: HRGMv2_4435_15_26
Type: TC
Location: 20528 - 21640 (+)
Type: TC
Location: 20528 - 21640 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.