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Cluster: HRGMv2_4435_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4435_11 HRGMv2_4435_11_6 5071 6297 - GH109
TF HRGMv2_4435_11 HRGMv2_4435_11_7 6418 7251 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4435_11 HRGMv2_4435_11_8 7321 9237 - GH13_39
CAZyme HRGMv2_4435_11 HRGMv2_4435_11_9 9312 11756 - GT35
CAZyme HRGMv2_4435_11 HRGMv2_4435_11_10 11789 13249 - GT5
pfam HRGMv2_4435_11 HRGMv2_4435_11_11 13277 14416 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4435_11 HRGMv2_4435_11_12 14423 15649 - NTP_transferase | Hexapep_GlmU
TC HRGMv2_4435_11 HRGMv2_4435_11_13 15705 17498 - 2.A.16.2.2
Gene ID: HRGMv2_4435_11_6
Type: CAZyme
Location: 5071 - 6297 (-)
Gene ID: HRGMv2_4435_11_7
Type: TF
Location: 6418 - 7251 (+)
Gene ID: HRGMv2_4435_11_8
Type: CAZyme
Location: 7321 - 9237 (-)
Gene ID: HRGMv2_4435_11_9
Type: CAZyme
Location: 9312 - 11756 (-)
Gene ID: HRGMv2_4435_11_10
Type: CAZyme
Location: 11789 - 13249 (-)
Gene ID: HRGMv2_4435_11_11
Type: pfam
Location: 13277 - 14416 (-)
Gene ID: HRGMv2_4435_11_12
Type: pfam
Location: 14423 - 15649 (-)
Gene ID: HRGMv2_4435_11_13
Type: TC
Location: 15705 - 17498 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA4717
→
Species
UBA4717 sp002404395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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