Cluster: HRGMv2_4435_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_6 | HRGMv2_4435_6_6 | 6032 | 7804 | + | GH181 |
| TC | HRGMv2_4435_6 | HRGMv2_4435_6_7 | 7988 | 9814 | + | 3.A.25.2.1 |
| NULL(UNKNOWN) | HRGMv2_4435_6 | HRGMv2_4435_6_8 | 9856 | 10065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4435_6 | HRGMv2_4435_6_9 | 10197 | 12251 | - | GH65 | GH95 |
| TF | HRGMv2_4435_6 | HRGMv2_4435_6_10 | 12431 | 13198 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4435_6 | HRGMv2_4435_6_11 | 13523 | 14902 | + | 2.A.26.1.3 |
Gene ID: HRGMv2_4435_6_6
Type: CAZyme
Location: 6032 - 7804 (+)
Type: CAZyme
Location: 6032 - 7804 (+)
Gene ID: HRGMv2_4435_6_7
Type: TC
Location: 7988 - 9814 (+)
Type: TC
Location: 7988 - 9814 (+)
Gene ID: HRGMv2_4435_6_8
Type:
Location: 9856 - 10065 (+)
Type:
Location: 9856 - 10065 (+)
Gene ID: HRGMv2_4435_6_9
Type: CAZyme
Location: 10197 - 12251 (-)
Type: CAZyme
Location: 10197 - 12251 (-)
Gene ID: HRGMv2_4435_6_10
Type: TF
Location: 12431 - 13198 (+)
Type: TF
Location: 12431 - 13198 (+)
Gene ID: HRGMv2_4435_6_11
Type: TC
Location: 13523 - 14902 (+)
Type: TC
Location: 13523 - 14902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.