Cluster: HRGMv2_4435_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4435_5 | HRGMv2_4435_5_10 | 10304 | 10912 | + | 9.B.156.3.1 |
| NULL(UNKNOWN) | HRGMv2_4435_5 | HRGMv2_4435_5_11 | 10909 | 11430 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4435_5 | HRGMv2_4435_5_12 | 11356 | 14079 | - | 9.B.144.1.5 |
| pfam | HRGMv2_4435_5 | HRGMv2_4435_5_13 | 14072 | 14278 | - | DUF951 |
| TF | HRGMv2_4435_5 | HRGMv2_4435_5_14 | 14498 | 15364 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4435_5 | HRGMv2_4435_5_15 | 15537 | 17471 | + | PL27 |
Gene ID: HRGMv2_4435_5_10
Type: TC
Location: 10304 - 10912 (+)
Type: TC
Location: 10304 - 10912 (+)
Gene ID: HRGMv2_4435_5_11
Type:
Location: 10909 - 11430 (+)
Type:
Location: 10909 - 11430 (+)
Gene ID: HRGMv2_4435_5_12
Type: TC
Location: 11356 - 14079 (-)
Type: TC
Location: 11356 - 14079 (-)
Gene ID: HRGMv2_4435_5_13
Type: pfam
Location: 14072 - 14278 (-)
Type: pfam
Location: 14072 - 14278 (-)
Gene ID: HRGMv2_4435_5_14
Type: TF
Location: 14498 - 15364 (-)
Type: TF
Location: 14498 - 15364 (-)
Gene ID: HRGMv2_4435_5_15
Type: CAZyme
Location: 15537 - 17471 (+)
Type: CAZyme
Location: 15537 - 17471 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.