Cluster: HRGMv2_4435_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- CGC Family ID: CGCFAM_00520
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4435_3 | HRGMv2_4435_3_31 | 36529 | 37380 | + | 3.A.1.24.5 |
| TC | HRGMv2_4435_3 | HRGMv2_4435_3_32 | 37390 | 38442 | + | 3.A.1.24.1 |
| TC | HRGMv2_4435_3 | HRGMv2_4435_3_33 | 38448 | 39155 | + | 3.A.1.24.5 |
| CAZyme | HRGMv2_4435_3 | HRGMv2_4435_3_34 | 39434 | 40513 | - | GH179 |
Gene ID: HRGMv2_4435_3_31
Type: TC
Location: 36529 - 37380 (+)
Type: TC
Location: 36529 - 37380 (+)
Gene ID: HRGMv2_4435_3_32
Type: TC
Location: 37390 - 38442 (+)
Type: TC
Location: 37390 - 38442 (+)
Gene ID: HRGMv2_4435_3_33
Type: TC
Location: 38448 - 39155 (+)
Type: TC
Location: 38448 - 39155 (+)
Gene ID: HRGMv2_4435_3_34
Type: CAZyme
Location: 39434 - 40513 (-)
Type: CAZyme
Location: 39434 - 40513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.