Cluster: HRGMv2_4435_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4435
- CGC Family ID: CGCFAM_00590
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4435_90 | HRGMv2_4435_90_1 | 3 | 1193 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_4435_90 | HRGMv2_4435_90_2 | 1270 | 2412 | + | GT28 |
| pfam | HRGMv2_4435_90 | HRGMv2_4435_90_3 | 2427 | 3236 | + | POTRA_1 |
| pfam | HRGMv2_4435_90 | HRGMv2_4435_90_4 | 3411 | 4493 | + | Tubulin | FtsZ_C |
| CAZyme | HRGMv2_4435_90 | HRGMv2_4435_90_5 | 4784 | 5851 | + | GH179 |
Gene ID: HRGMv2_4435_90_1
Type: TC
Location: 3 - 1193 (+)
Type: TC
Location: 3 - 1193 (+)
Gene ID: HRGMv2_4435_90_2
Type: CAZyme
Location: 1270 - 2412 (+)
Type: CAZyme
Location: 1270 - 2412 (+)
Gene ID: HRGMv2_4435_90_3
Type: pfam
Location: 2427 - 3236 (+)
Type: pfam
Location: 2427 - 3236 (+)
Gene ID: HRGMv2_4435_90_4
Type: pfam
Location: 3411 - 4493 (+)
Type: pfam
Location: 3411 - 4493 (+)
Gene ID: HRGMv2_4435_90_5
Type: CAZyme
Location: 4784 - 5851 (+)
Type: CAZyme
Location: 4784 - 5851 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.