Cluster: HRGMv2_4435_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- CGC Family ID: CGCFAM_00231
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_86 | HRGMv2_4435_86_1 | 204 | 2072 | + | GH127 |
| TC | HRGMv2_4435_86 | HRGMv2_4435_86_2 | 2191 | 3588 | - | 3.B.1.1.6 |
| TC | HRGMv2_4435_86 | HRGMv2_4435_86_3 | 3743 | 4939 | - | 3.B.1.1.2 |
| TC | HRGMv2_4435_86 | HRGMv2_4435_86_4 | 5003 | 5389 | - | 3.B.1.1.2 |
| pfam | HRGMv2_4435_86 | HRGMv2_4435_86_5 | 5459 | 5842 | - | OAD_gamma |
| TC | HRGMv2_4435_86 | HRGMv2_4435_86_6 | 6020 | 7486 | - | 3.B.1.1.2 |
Gene ID: HRGMv2_4435_86_1
Type: CAZyme
Location: 204 - 2072 (+)
Type: CAZyme
Location: 204 - 2072 (+)
Gene ID: HRGMv2_4435_86_2
Type: TC
Location: 2191 - 3588 (-)
Type: TC
Location: 2191 - 3588 (-)
Gene ID: HRGMv2_4435_86_3
Type: TC
Location: 3743 - 4939 (-)
Type: TC
Location: 3743 - 4939 (-)
Gene ID: HRGMv2_4435_86_4
Type: TC
Location: 5003 - 5389 (-)
Type: TC
Location: 5003 - 5389 (-)
Gene ID: HRGMv2_4435_86_5
Type: pfam
Location: 5459 - 5842 (-)
Type: pfam
Location: 5459 - 5842 (-)
Gene ID: HRGMv2_4435_86_6
Type: TC
Location: 6020 - 7486 (-)
Type: TC
Location: 6020 - 7486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.