Cluster: HRGMv2_4435_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_80 | HRGMv2_4435_80_3 | 2307 | 5225 | - | GH106 |
| TF | HRGMv2_4435_80 | HRGMv2_4435_80_4 | 5665 | 6543 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4435_80 | HRGMv2_4435_80_5 | 6522 | 7598 | - | 2.A.86.1.3 |
| pfam | HRGMv2_4435_80 | HRGMv2_4435_80_6 | 7778 | 8284 | - | VanZ |
| pfam | HRGMv2_4435_80 | HRGMv2_4435_80_7 | 8281 | 9477 | - | Homoserine_dh | NAD_binding_3 |
| TC | HRGMv2_4435_80 | HRGMv2_4435_80_8 | 9545 | 10927 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_4435_80_3
Type: CAZyme
Location: 2307 - 5225 (-)
Type: CAZyme
Location: 2307 - 5225 (-)
Gene ID: HRGMv2_4435_80_4
Type: TF
Location: 5665 - 6543 (+)
Type: TF
Location: 5665 - 6543 (+)
Gene ID: HRGMv2_4435_80_5
Type: TC
Location: 6522 - 7598 (-)
Type: TC
Location: 6522 - 7598 (-)
Gene ID: HRGMv2_4435_80_6
Type: pfam
Location: 7778 - 8284 (-)
Type: pfam
Location: 7778 - 8284 (-)
Gene ID: HRGMv2_4435_80_7
Type: pfam
Location: 8281 - 9477 (-)
Type: pfam
Location: 8281 - 9477 (-)
Gene ID: HRGMv2_4435_80_8
Type: TC
Location: 9545 - 10927 (-)
Type: TC
Location: 9545 - 10927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.