Cluster: HRGMv2_4435_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4435_70 | HRGMv2_4435_70_5 | 5037 | 6806 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_4435_70 | HRGMv2_4435_70_6 | 7062 | 9035 | + | GH13_8 |
| pfam | HRGMv2_4435_70 | HRGMv2_4435_70_7 | 9051 | 10148 | + | Mbeg1-like |
| TF | HRGMv2_4435_70 | HRGMv2_4435_70_8 | 10195 | 10992 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4435_70 | HRGMv2_4435_70_9 | 11191 | 12426 | + | GH3 |
Gene ID: HRGMv2_4435_70_5
Type: TC
Location: 5037 - 6806 (-)
Type: TC
Location: 5037 - 6806 (-)
Gene ID: HRGMv2_4435_70_6
Type: CAZyme
Location: 7062 - 9035 (+)
Type: CAZyme
Location: 7062 - 9035 (+)
Gene ID: HRGMv2_4435_70_7
Type: pfam
Location: 9051 - 10148 (+)
Type: pfam
Location: 9051 - 10148 (+)
Gene ID: HRGMv2_4435_70_8
Type: TF
Location: 10195 - 10992 (-)
Type: TF
Location: 10195 - 10992 (-)
Gene ID: HRGMv2_4435_70_9
Type: CAZyme
Location: 11191 - 12426 (+)
Type: CAZyme
Location: 11191 - 12426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.