Cluster: HRGMv2_4435_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_64 | HRGMv2_4435_64_2 | 2547 | 4292 | + | GH36 |
| TF | HRGMv2_4435_64 | HRGMv2_4435_64_3 | 4297 | 5163 | - | HTH_1 |
| TC | HRGMv2_4435_64 | HRGMv2_4435_64_4 | 5284 | 6825 | + | 2.A.21.2.5 |
| TF | HRGMv2_4435_64 | HRGMv2_4435_64_5 | 6867 | 7235 | + | Trp_repressor |
| pfam | HRGMv2_4435_64 | HRGMv2_4435_64_6 | 7430 | 11815 | + | BcrAD_BadFG | BcrAD_BadFG | DUF2229 |
| CAZyme | HRGMv2_4435_64 | HRGMv2_4435_64_7 | 12021 | 13022 | - | GH29 |
Gene ID: HRGMv2_4435_64_2
Type: CAZyme
Location: 2547 - 4292 (+)
Type: CAZyme
Location: 2547 - 4292 (+)
Gene ID: HRGMv2_4435_64_3
Type: TF
Location: 4297 - 5163 (-)
Type: TF
Location: 4297 - 5163 (-)
Gene ID: HRGMv2_4435_64_4
Type: TC
Location: 5284 - 6825 (+)
Type: TC
Location: 5284 - 6825 (+)
Gene ID: HRGMv2_4435_64_5
Type: TF
Location: 6867 - 7235 (+)
Type: TF
Location: 6867 - 7235 (+)
Gene ID: HRGMv2_4435_64_6
Type: pfam
Location: 7430 - 11815 (+)
Type: pfam
Location: 7430 - 11815 (+)
Gene ID: HRGMv2_4435_64_7
Type: CAZyme
Location: 12021 - 13022 (-)
Type: CAZyme
Location: 12021 - 13022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.