Cluster: HRGMv2_4435_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4435_3 | HRGMv2_4435_3_17 | 16045 | 17088 | - | GH179 |
| pfam | HRGMv2_4435_3 | HRGMv2_4435_3_18 | 17103 | 18377 | - | GTP1_OBG | MMR_HSR1 | FeoB_N | DUF1967 |
| pfam | HRGMv2_4435_3 | HRGMv2_4435_3_19 | 18664 | 20688 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | HHH_2 | HHH_5 | HHH_5 | Nlig-Ia |
| CAZyme | HRGMv2_4435_3 | HRGMv2_4435_3_20 | 20919 | 22055 | - | GT4 |
| TC | HRGMv2_4435_3 | HRGMv2_4435_3_21 | 22039 | 23592 | - | 2.A.66.4.7 |
Gene ID: HRGMv2_4435_3_17
Type: CAZyme
Location: 16045 - 17088 (-)
Type: CAZyme
Location: 16045 - 17088 (-)
Gene ID: HRGMv2_4435_3_18
Type: pfam
Location: 17103 - 18377 (-)
Type: pfam
Location: 17103 - 18377 (-)
Gene ID: HRGMv2_4435_3_19
Type: pfam
Location: 18664 - 20688 (-)
Type: pfam
Location: 18664 - 20688 (-)
Gene ID: HRGMv2_4435_3_20
Type: CAZyme
Location: 20919 - 22055 (-)
Type: CAZyme
Location: 20919 - 22055 (-)
Gene ID: HRGMv2_4435_3_21
Type: TC
Location: 22039 - 23592 (-)
Type: TC
Location: 22039 - 23592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.