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Cluster: HRGMv2_4435_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4435_48 HRGMv2_4435_48_5 1656 7760 - CBM67 | GH78
TF HRGMv2_4435_48 HRGMv2_4435_48_6 8035 9033 + HTH_AraC
TC HRGMv2_4435_48 HRGMv2_4435_48_7 9276 10637 + 3.A.1.1.45
TC HRGMv2_4435_48 HRGMv2_4435_48_8 10654 11502 + 3.A.1.1.45
TC HRGMv2_4435_48 HRGMv2_4435_48_9 11565 12401 + 3.A.1.1.45
TC HRGMv2_4435_48 HRGMv2_4435_48_10 12457 13560 + 3.A.1.1.24
CAZyme HRGMv2_4435_48 HRGMv2_4435_48_11 13557 15035 + GH77
CAZyme HRGMv2_4435_48 HRGMv2_4435_48_12 15073 17424 + GT35
Gene ID: HRGMv2_4435_48_5
Type: CAZyme
Location: 1656 - 7760 (-)
Gene ID: HRGMv2_4435_48_6
Type: TF
Location: 8035 - 9033 (+)
Gene ID: HRGMv2_4435_48_7
Type: TC
Location: 9276 - 10637 (+)
Gene ID: HRGMv2_4435_48_8
Type: TC
Location: 10654 - 11502 (+)
Gene ID: HRGMv2_4435_48_9
Type: TC
Location: 11565 - 12401 (+)
Gene ID: HRGMv2_4435_48_10
Type: TC
Location: 12457 - 13560 (+)
Gene ID: HRGMv2_4435_48_11
Type: CAZyme
Location: 13557 - 15035 (+)
Gene ID: HRGMv2_4435_48_12
Type: CAZyme
Location: 15073 - 17424 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA4717
→
Species
UBA4717 sp002404395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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