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Cluster: HRGMv2_4435_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4435_33 HRGMv2_4435_33_1 103 1959 + 3.A.1.5.2
TC HRGMv2_4435_33 HRGMv2_4435_33_2 2380 3240 + 3.A.1.3.27
TC HRGMv2_4435_33 HRGMv2_4435_33_3 3424 4467 + 3.A.1.3.17
TC HRGMv2_4435_33 HRGMv2_4435_33_4 4481 5263 + 3.A.1.3.24
STP HRGMv2_4435_33 HRGMv2_4435_33_5 5477 6478 - Peripla_BP_1
TC HRGMv2_4435_33 HRGMv2_4435_33_6 6468 8195 - 8.A.59.2.1
TF HRGMv2_4435_33 HRGMv2_4435_33_7 8196 9785 - HTH_AraC
pfam HRGMv2_4435_33 HRGMv2_4435_33_8 9973 10344 - Flg_new
TC HRGMv2_4435_33 HRGMv2_4435_33_9 10396 11481 - 3.A.1.2.3
TC HRGMv2_4435_33 HRGMv2_4435_33_10 11531 13042 - 3.A.1.2.3
TC HRGMv2_4435_33 HRGMv2_4435_33_11 13125 14198 - 3.A.1.2.3
pfam HRGMv2_4435_33 HRGMv2_4435_33_12 14511 17624 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme HRGMv2_4435_33 HRGMv2_4435_33_13 18364 19515 + GT28
pfam HRGMv2_4435_33 HRGMv2_4435_33_14 19651 20958 + Acyltransferase
CAZyme HRGMv2_4435_33 HRGMv2_4435_33_15 20890 22191 - GH18
Gene ID: HRGMv2_4435_33_1
Type: TC
Location: 103 - 1959 (+)
Gene ID: HRGMv2_4435_33_2
Type: TC
Location: 2380 - 3240 (+)
Gene ID: HRGMv2_4435_33_3
Type: TC
Location: 3424 - 4467 (+)
Gene ID: HRGMv2_4435_33_4
Type: TC
Location: 4481 - 5263 (+)
Gene ID: HRGMv2_4435_33_5
Type: STP
Location: 5477 - 6478 (-)
Gene ID: HRGMv2_4435_33_6
Type: TC
Location: 6468 - 8195 (-)
Gene ID: HRGMv2_4435_33_7
Type: TF
Location: 8196 - 9785 (-)
Gene ID: HRGMv2_4435_33_8
Type: pfam
Location: 9973 - 10344 (-)
Gene ID: HRGMv2_4435_33_9
Type: TC
Location: 10396 - 11481 (-)
Gene ID: HRGMv2_4435_33_10
Type: TC
Location: 11531 - 13042 (-)
Gene ID: HRGMv2_4435_33_11
Type: TC
Location: 13125 - 14198 (-)
Gene ID: HRGMv2_4435_33_12
Type: pfam
Location: 14511 - 17624 (-)
Gene ID: HRGMv2_4435_33_13
Type: CAZyme
Location: 18364 - 19515 (+)
Gene ID: HRGMv2_4435_33_14
Type: pfam
Location: 19651 - 20958 (+)
Gene ID: HRGMv2_4435_33_15
Type: CAZyme
Location: 20890 - 22191 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA4717
→
Species
UBA4717 sp002404395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4435_33_1 vegetarian > vegan 2.11764 0.00821

🧭 Explore Read Mapping of CGC

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