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Cluster: HRGMv2_4435_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4435_26 HRGMv2_4435_26_3 2507 3217 - 3.A.1.4.10
TC HRGMv2_4435_26 HRGMv2_4435_26_4 3239 4003 - 3.A.1.4.10
TC HRGMv2_4435_26 HRGMv2_4435_26_5 4000 5157 - 3.A.1.4.8
TC HRGMv2_4435_26 HRGMv2_4435_26_6 5160 6023 - 3.A.1.4.10
TC HRGMv2_4435_26 HRGMv2_4435_26_7 6176 7324 - 3.A.1.4.10
pfam HRGMv2_4435_26 HRGMv2_4435_26_8 7744 8739 + NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
pfam HRGMv2_4435_26 HRGMv2_4435_26_9 8955 9944 + GalP_UDP_transf | GalP_UDP_tr_C | DUF4931_N
CAZyme HRGMv2_4435_26 HRGMv2_4435_26_10 10029 10841 + CE4
Gene ID: HRGMv2_4435_26_3
Type: TC
Location: 2507 - 3217 (-)
Gene ID: HRGMv2_4435_26_4
Type: TC
Location: 3239 - 4003 (-)
Gene ID: HRGMv2_4435_26_5
Type: TC
Location: 4000 - 5157 (-)
Gene ID: HRGMv2_4435_26_6
Type: TC
Location: 5160 - 6023 (-)
Gene ID: HRGMv2_4435_26_7
Type: TC
Location: 6176 - 7324 (-)
Gene ID: HRGMv2_4435_26_8
Type: pfam
Location: 7744 - 8739 (+)
Gene ID: HRGMv2_4435_26_9
Type: pfam
Location: 8955 - 9944 (+)
Gene ID: HRGMv2_4435_26_10
Type: CAZyme
Location: 10029 - 10841 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA4717
→
Species
UBA4717 sp002404395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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