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Cluster: HRGMv2_4435_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4435_16 HRGMv2_4435_16_14 16873 18249 - 2.A.22.5.3
CAZyme HRGMv2_4435_16 HRGMv2_4435_16_15 18395 20734 - GH2
pfam HRGMv2_4435_16 HRGMv2_4435_16_16 21023 22264 - MFS_1
pfam HRGMv2_4435_16 HRGMv2_4435_16_17 22620 24716 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
TC HRGMv2_4435_16 HRGMv2_4435_16_18 25048 25887 + 2.A.115.1.1
pfam HRGMv2_4435_16 HRGMv2_4435_16_19 26134 26865 - AP_endonuc_2
pfam HRGMv2_4435_16 HRGMv2_4435_16_20 27097 30291 - SLH | SLH | SLH
TC HRGMv2_4435_16 HRGMv2_4435_16_21 30674 32062 + 2.A.66.1.28
Gene ID: HRGMv2_4435_16_14
Type: TC
Location: 16873 - 18249 (-)
Gene ID: HRGMv2_4435_16_15
Type: CAZyme
Location: 18395 - 20734 (-)
Gene ID: HRGMv2_4435_16_16
Type: pfam
Location: 21023 - 22264 (-)
Gene ID: HRGMv2_4435_16_17
Type: pfam
Location: 22620 - 24716 (-)
Gene ID: HRGMv2_4435_16_18
Type: TC
Location: 25048 - 25887 (+)
Gene ID: HRGMv2_4435_16_19
Type: pfam
Location: 26134 - 26865 (-)
Gene ID: HRGMv2_4435_16_20
Type: pfam
Location: 27097 - 30291 (-)
Gene ID: HRGMv2_4435_16_21
Type: TC
Location: 30674 - 32062 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA4717
→
Species
UBA4717 sp002404395

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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