Cluster: HRGMv2_4435_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4435
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4435_2 | HRGMv2_4435_2_7 | 8806 | 9513 | + | 3.A.1.122.2 |
| TC | HRGMv2_4435_2 | HRGMv2_4435_2_8 | 9524 | 10693 | + | 3.A.1.122.2 |
| pfam | HRGMv2_4435_2 | HRGMv2_4435_2_9 | 10709 | 13066 | + | SLH |
| TC | HRGMv2_4435_2 | HRGMv2_4435_2_10 | 13174 | 14607 | - | 1.A.26.1.3 |
| CAZyme | HRGMv2_4435_2 | HRGMv2_4435_2_11 | 15156 | 17204 | + | GH42 |
| NULL(UNKNOWN) | HRGMv2_4435_2 | HRGMv2_4435_2_12 | 17201 | 17644 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4435_2 | HRGMv2_4435_2_13 | 17896 | 19629 | + | 3.A.1.135.7 |
| TC | HRGMv2_4435_2 | HRGMv2_4435_2_14 | 19643 | 21406 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4435_2_7
Type: TC
Location: 8806 - 9513 (+)
Type: TC
Location: 8806 - 9513 (+)
Gene ID: HRGMv2_4435_2_8
Type: TC
Location: 9524 - 10693 (+)
Type: TC
Location: 9524 - 10693 (+)
Gene ID: HRGMv2_4435_2_9
Type: pfam
Location: 10709 - 13066 (+)
Type: pfam
Location: 10709 - 13066 (+)
Gene ID: HRGMv2_4435_2_10
Type: TC
Location: 13174 - 14607 (-)
Type: TC
Location: 13174 - 14607 (-)
Gene ID: HRGMv2_4435_2_11
Type: CAZyme
Location: 15156 - 17204 (+)
Type: CAZyme
Location: 15156 - 17204 (+)
Gene ID: HRGMv2_4435_2_12
Type:
Location: 17201 - 17644 (+)
Type:
Location: 17201 - 17644 (+)
Gene ID: HRGMv2_4435_2_13
Type: TC
Location: 17896 - 19629 (+)
Type: TC
Location: 17896 - 19629 (+)
Gene ID: HRGMv2_4435_2_14
Type: TC
Location: 19643 - 21406 (+)
Type: TC
Location: 19643 - 21406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA4717
Species
UBA4717 sp002404395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.