Cluster: HRGMv2_4434_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_00142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_12 | HRGMv2_4434_12_21 | 35571 | 37238 | + | 3.A.1.121.3 |
| NULL(UNKNOWN) | HRGMv2_4434_12 | HRGMv2_4434_12_22 | 37321 | 37860 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4434_12 | HRGMv2_4434_12_23 | 38479 | 39312 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4434_12 | HRGMv2_4434_12_24 | 39652 | 40800 | + | GH179 |
Gene ID: HRGMv2_4434_12_21
Type: TC
Location: 35571 - 37238 (+)
Type: TC
Location: 35571 - 37238 (+)
Gene ID: HRGMv2_4434_12_22
Type:
Location: 37321 - 37860 (+)
Type:
Location: 37321 - 37860 (+)
Gene ID: HRGMv2_4434_12_23
Type: pfam
Location: 38479 - 39312 (+)
Type: pfam
Location: 38479 - 39312 (+)
Gene ID: HRGMv2_4434_12_24
Type: CAZyme
Location: 39652 - 40800 (+)
Type: CAZyme
Location: 39652 - 40800 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.