Cluster: HRGMv2_4434_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_10625
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_9 | HRGMv2_4434_9_19 | 19552 | 20937 | + | 2.A.38.4.3 |
| TC | HRGMv2_4434_9 | HRGMv2_4434_9_20 | 21017 | 21688 | + | 2.A.38.4.4 |
| NULL(UNKNOWN) | HRGMv2_4434_9 | HRGMv2_4434_9_21 | 22212 | 22388 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4434_9 | HRGMv2_4434_9_22 | 22574 | 23290 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_4434_9 | HRGMv2_4434_9_23 | 23332 | 24417 | - | GH179 |
Gene ID: HRGMv2_4434_9_19
Type: TC
Location: 19552 - 20937 (+)
Type: TC
Location: 19552 - 20937 (+)
Gene ID: HRGMv2_4434_9_20
Type: TC
Location: 21017 - 21688 (+)
Type: TC
Location: 21017 - 21688 (+)
Gene ID: HRGMv2_4434_9_21
Type:
Location: 22212 - 22388 (+)
Type:
Location: 22212 - 22388 (+)
Gene ID: HRGMv2_4434_9_22
Type: pfam
Location: 22574 - 23290 (-)
Type: pfam
Location: 22574 - 23290 (-)
Gene ID: HRGMv2_4434_9_23
Type: CAZyme
Location: 23332 - 24417 (-)
Type: CAZyme
Location: 23332 - 24417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.