Cluster: HRGMv2_4434_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_00978
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_3 | HRGMv2_4434_3_40 | 43196 | 44722 | - | 9.A.11.1.2 |
| pfam | HRGMv2_4434_3 | HRGMv2_4434_3_41 | 45080 | 45757 | + | DUF421 |
| pfam | HRGMv2_4434_3 | HRGMv2_4434_3_42 | 45797 | 46177 | + | DUF4363 |
| CAZyme | HRGMv2_4434_3 | HRGMv2_4434_3_43 | 46267 | 47733 | - | CE2 |
| CAZyme | HRGMv2_4434_3 | HRGMv2_4434_3_44 | 48000 | 49199 | - | GT4 |
Gene ID: HRGMv2_4434_3_40
Type: TC
Location: 43196 - 44722 (-)
Type: TC
Location: 43196 - 44722 (-)
Gene ID: HRGMv2_4434_3_41
Type: pfam
Location: 45080 - 45757 (+)
Type: pfam
Location: 45080 - 45757 (+)
Gene ID: HRGMv2_4434_3_42
Type: pfam
Location: 45797 - 46177 (+)
Type: pfam
Location: 45797 - 46177 (+)
Gene ID: HRGMv2_4434_3_43
Type: CAZyme
Location: 46267 - 47733 (-)
Type: CAZyme
Location: 46267 - 47733 (-)
Gene ID: HRGMv2_4434_3_44
Type: CAZyme
Location: 48000 - 49199 (-)
Type: CAZyme
Location: 48000 - 49199 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.