Cluster: HRGMv2_4434_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_172 | HRGMv2_4434_172_1 | 1 | 180 | + | 3.A.1.4.11 |
| pfam | HRGMv2_4434_172 | HRGMv2_4434_172_2 | 342 | 1067 | + | AzlC |
| pfam | HRGMv2_4434_172 | HRGMv2_4434_172_3 | 1064 | 1387 | + | AzlD |
| CAZyme | HRGMv2_4434_172 | HRGMv2_4434_172_4 | 1844 | 2557 | - | GH78 |
Gene ID: HRGMv2_4434_172_1
Type: TC
Location: 1 - 180 (+)
Type: TC
Location: 1 - 180 (+)
Gene ID: HRGMv2_4434_172_2
Type: pfam
Location: 342 - 1067 (+)
Type: pfam
Location: 342 - 1067 (+)
Gene ID: HRGMv2_4434_172_3
Type: pfam
Location: 1064 - 1387 (+)
Type: pfam
Location: 1064 - 1387 (+)
Gene ID: HRGMv2_4434_172_4
Type: CAZyme
Location: 1844 - 2557 (-)
Type: CAZyme
Location: 1844 - 2557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.