Cluster: HRGMv2_4434_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_10624
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_91 | HRGMv2_4434_91_2 | 205 | 1050 | + | 3.A.1.7.5 |
| TC | HRGMv2_4434_91 | HRGMv2_4434_91_3 | 1065 | 1820 | + | 3.A.1.7.5 |
| pfam | HRGMv2_4434_91 | HRGMv2_4434_91_4 | 1843 | 2520 | + | PhoU | PhoU |
| CAZyme | HRGMv2_4434_91 | HRGMv2_4434_91_5 | 2583 | 3830 | - | GH29 |
| CAZyme | HRGMv2_4434_91 | HRGMv2_4434_91_6 | 3992 | 5440 | - | CE20 |
| CAZyme | HRGMv2_4434_91 | HRGMv2_4434_91_7 | 5459 | 6781 | - | GH4 |
| TF | HRGMv2_4434_91 | HRGMv2_4434_91_8 | 6804 | 7616 | - | HTH_AraC |
| CAZyme | HRGMv2_4434_91 | HRGMv2_4434_91_9 | 7658 | 8905 | - | GH16 |
Gene ID: HRGMv2_4434_91_2
Type: TC
Location: 205 - 1050 (+)
Type: TC
Location: 205 - 1050 (+)
Gene ID: HRGMv2_4434_91_3
Type: TC
Location: 1065 - 1820 (+)
Type: TC
Location: 1065 - 1820 (+)
Gene ID: HRGMv2_4434_91_4
Type: pfam
Location: 1843 - 2520 (+)
Type: pfam
Location: 1843 - 2520 (+)
Gene ID: HRGMv2_4434_91_5
Type: CAZyme
Location: 2583 - 3830 (-)
Type: CAZyme
Location: 2583 - 3830 (-)
Gene ID: HRGMv2_4434_91_6
Type: CAZyme
Location: 3992 - 5440 (-)
Type: CAZyme
Location: 3992 - 5440 (-)
Gene ID: HRGMv2_4434_91_7
Type: CAZyme
Location: 5459 - 6781 (-)
Type: CAZyme
Location: 5459 - 6781 (-)
Gene ID: HRGMv2_4434_91_8
Type: TF
Location: 6804 - 7616 (-)
Type: TF
Location: 6804 - 7616 (-)
Gene ID: HRGMv2_4434_91_9
Type: CAZyme
Location: 7658 - 8905 (-)
Type: CAZyme
Location: 7658 - 8905 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.