Cluster: HRGMv2_4434_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4434_87 | HRGMv2_4434_87_5 | 3254 | 3856 | + | GH23 |
| peptidase | HRGMv2_4434_87 | HRGMv2_4434_87_6 | 3911 | 5326 | + | M18.UPW |
| pfam | HRGMv2_4434_87 | HRGMv2_4434_87_7 | 5961 | 6932 | + | SH3_4 | SH3_3 | SH3_3 | Peptidase_C70 | Peptidase_C39_2 |
| TC | HRGMv2_4434_87 | HRGMv2_4434_87_8 | 7553 | 9457 | - | 3.A.1.135.5 |
| TC | HRGMv2_4434_87 | HRGMv2_4434_87_9 | 9450 | 9704 | - | 3.A.1.135.8 |
Gene ID: HRGMv2_4434_87_5
Type: CAZyme
Location: 3254 - 3856 (+)
Type: CAZyme
Location: 3254 - 3856 (+)
Gene ID: HRGMv2_4434_87_6
Type: peptidase
Location: 3911 - 5326 (+)
Type: peptidase
Location: 3911 - 5326 (+)
Gene ID: HRGMv2_4434_87_7
Type: pfam
Location: 5961 - 6932 (+)
Type: pfam
Location: 5961 - 6932 (+)
Gene ID: HRGMv2_4434_87_8
Type: TC
Location: 7553 - 9457 (-)
Type: TC
Location: 7553 - 9457 (-)
Gene ID: HRGMv2_4434_87_9
Type: TC
Location: 9450 - 9704 (-)
Type: TC
Location: 9450 - 9704 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.