Cluster: HRGMv2_4434_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_77 | HRGMv2_4434_77_4 | 2570 | 4321 | + | 3.A.1.135.5 |
| TC | HRGMv2_4434_77 | HRGMv2_4434_77_5 | 4318 | 6069 | + | 3.A.1.135.6 |
| STP | HRGMv2_4434_77 | HRGMv2_4434_77_6 | 6479 | 6916 | - | ACT | ACT |
| pfam | HRGMv2_4434_77 | HRGMv2_4434_77_7 | 7073 | 8371 | - | AMP-binding | AMP-binding_C_2 |
| CAZyme | HRGMv2_4434_77 | HRGMv2_4434_77_8 | 8553 | 10817 | - | CBM67 | GH78 |
Gene ID: HRGMv2_4434_77_4
Type: TC
Location: 2570 - 4321 (+)
Type: TC
Location: 2570 - 4321 (+)
Gene ID: HRGMv2_4434_77_5
Type: TC
Location: 4318 - 6069 (+)
Type: TC
Location: 4318 - 6069 (+)
Gene ID: HRGMv2_4434_77_6
Type: STP
Location: 6479 - 6916 (-)
Type: STP
Location: 6479 - 6916 (-)
Gene ID: HRGMv2_4434_77_7
Type: pfam
Location: 7073 - 8371 (-)
Type: pfam
Location: 7073 - 8371 (-)
Gene ID: HRGMv2_4434_77_8
Type: CAZyme
Location: 8553 - 10817 (-)
Type: CAZyme
Location: 8553 - 10817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.